biocthis

DOI: 10.18129/B9.bioc.biocthis  

Automate package and project setup for Bioconductor packages

Bioconductor version: Release (3.16)

This package expands the usethis package with the goal of helping automate the process of creating R packages for Bioconductor or making them Bioconductor-friendly.

Author: Leonardo Collado-Torres [aut, cre] , Marcel Ramos [ctb]

Maintainer: Leonardo Collado-Torres <lcolladotor at gmail.com>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("biocthis")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("biocthis")

 

HTML	R Script	biocthis developer notes
HTML	R Script	Introduction to biocthis
PDF		Reference Manual
Text		NEWS

Details

biocViews	ReportWriting, Software
Version	1.8.3
In Bioconductor since	BioC 3.12 (R-4.0) (2.5 years)
License	Artistic-2.0
Depends
Imports	BiocManager, fs, glue, rlang, styler, usethis (>= 2.0.1)
LinkingTo
Suggests	BiocStyle, covr, devtools, knitr, pkgdown, RefManageR, rmarkdown, sessioninfo, testthat, utils
SystemRequirements
Enhances
URL	https://github.com/lcolladotor/biocthis
BugReports	https://support.bioconductor.org/tag/biocthis
Depends On Me
Imports Me	HubPub
Suggests Me	tripr
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	biocthis_1.8.3.tar.gz
Windows Binary	biocthis_1.8.3.zip
macOS Binary (x86_64)	biocthis_1.8.3.tgz
macOS Binary (arm64)	biocthis_1.8.3.tgz
Source Repository	git clone https://git.bioconductor.org/packages/biocthis
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/biocthis
Bioc Package Browser	https://code.bioconductor.org/browse/biocthis/
Package Short Url	https://bioconductor.org/packages/biocthis/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.16	Source Archive