ccdata

DOI: 10.18129/B9.bioc.ccdata  

Data for Combination Connectivity Mapping (ccmap) Package

Bioconductor version: Release (3.16)

This package contains microarray gene expression data generated from the Connectivity Map build 02 and LINCS l1000. The data are used by the ccmap package to find drugs and drug combinations to mimic or reverse a gene expression signature.

Author: Alex Pickering

Maintainer: Alex Pickering <alexvpickering at gmail.com>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ccdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual
Text		LICENSE

Details

biocViews	ExperimentData, ExpressionData, MicroarrayData
Version	1.24.0
License	MIT + file LICENSE
Depends	R (>= 3.3)
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me	ccmap
Suggests Me	retriever
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ccdata_1.24.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/ccdata
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/ccdata
Package Short Url	https://bioconductor.org/packages/ccdata/
Package Downloads Report	Download Stats