a4Preproc

DOI: 10.18129/B9.bioc.a4Preproc  

Automated Affymetrix Array Analysis Preprocessing Package

Bioconductor version: Release (3.16)

Utility functions to pre-process data for the Automated Affymetrix Array Analysis set of packages.

Author: Willem Talloen [aut], Tobias Verbeke [aut], Laure Cougnaud [cre]

Maintainer: Laure Cougnaud <laure.cougnaud at openanalytics.eu>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("a4Preproc")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("a4Preproc")

 

HTML	R Script	a4Preproc package
PDF		Reference Manual
Text		NEWS

Details

biocViews	Microarray, Preprocessing, Software
Version	1.46.0
In Bioconductor since	BioC 2.8 (R-2.13) (12 years)
License	GPL-3
Depends
Imports	BiocGenerics, Biobase
LinkingTo
Suggests	ALL, hgu95av2.db, knitr, rmarkdown
SystemRequirements
Enhances
URL
Depends On Me	a4, a4Base, a4Classif
Imports Me
Suggests Me	graphite
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	a4Preproc_1.46.0.tar.gz
Windows Binary	a4Preproc_1.46.0.zip
macOS Binary (x86_64)	a4Preproc_1.46.0.tgz
macOS Binary (arm64)	a4Preproc_1.46.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/a4Preproc
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/a4Preproc
Bioc Package Browser	https://code.bioconductor.org/browse/a4Preproc/
Package Short Url	https://bioconductor.org/packages/a4Preproc/
Package Downloads Report	Download Stats